Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015948093.1_cds_XP_016489467.1_79986
CDS Infomation

[gene=LOC107809370] [db_xref=GeneID:107809370] [protein=protein ROOT PRIMORDIUM DEFECTIVE 1-like] [protein_id=XP_016489467.1] [location=complement(41312..42721)] [gbkey=CDS]
Sequence

ATGCAGATTTTCCTTACAATTTCTACAAAGCTCTTACAATCCAAATCCAAACCCTTCAAT
TCCCTCACCTGGATTCCTCCACTTTTCTTACAATTCACAAAACAAATGTCACAGACAACT
TCCATACCCAGAAACCAACAACGCGTTCGCGACCACGGTTACGATGATTACATGGAAGTT
GAAAAAAAAATCCGCAAAGTTATGAAATTCCAAGACCAGCTCCTCACTCAGCCAAATTCA
ATGATCCCCATTTCTCGCCTTGACATGCTGGCTCGCCGTTTCGGGTTCAAGCAATACGAA
GCAGGCAAGTTTATTCTCAAATTCCCACATGTTTTCGAGGTTTTCGAACACCCGGTACAA
AGAATTCTTTATTGCAGGCTCACCCGTAAAGCATTGCTTCAAATTGAGCAAGAAAAAATA
GCCCTTTTTGCTCAATTACCTGAAGCTGTAACCCGTTTAAGAAAGCTTTTAATGCTTTCT
AAGACGGGGAGATTAAGGCTAGAACATGTGAGGATTGCAAGGAAAGAATTTGGTTTACCT
GATGATTTTGAGTTTTCTGTTGTTTTGAAGTATCCTATGTATTTTAGGTTGTTTGATGCT
AAAGAGACTAGGAACAAGTACATTGAGGTTGTAGAGAAAGACCAGATGTTAGCTGTTTGT
GCTGTGGAGAGAGTTAGGGAGAAAGAGTATAGAGAAAAGGGTGGTGAAGAAGAAAATGTG
AGGTTTTATTTTAGGGTGAATTTCCCACCAGGTTTCAAGATTGGGAAGTATTATAAGATT
GCTGTTTGGAAATGGCAAAGGCTGCCTTATTGGTCGCCTTATGAGGATATCTCGGGTTAT
GATTTGAGGTCGCTCGAGGCACAGAAGAGGATGGAGAAGAGAGCAGTGGCCACTATTCAT
GAGTTGCTGTCATTGACGGTTGAAAAGAAGATTACTTTGGAGAGAATCGCGCATTTTAGG
TTGGCGATGGATTTGCCAAAGAAGCTGAAGGACTTTCTCCTTCAGCATCAGGGAATATTT
TATATCTCGACAAGGGGAAATCAGGGGAAATTGCATACGGTGTTTCTCAGGGAGGCTTAT
AGGAAGGGAGAGTTGATTGAGCCAAATGATCTGTATTTAGCTAGGAGAAGGCTGGCTGAG
TTGGTTTTGATGAGTCCAAGGAAAGCCAATATGGATAAAGAATTGGTTAATTATAGAAGG
CGGGGAGACGATGATGAAATAGCTGATGTTAGAAGAGACAACACCGAGAATGAAGGAGAT
CATTCAACAGTTCAAGAGACAGTTAGCCAAGATGAGGAGAGAGAAGAAAGTGTGGACTAC
GATGATGATTGCAGCAGTGACTCTAAGTACACAGATGAAGAAGACAGTGGGGATGATGTT
ACTGATGATTTAGGAAAAGAAACATCATAA

Peptide Sequence

PEP ID

XP_016489467.1
PEP Infomation

PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Nicotiana tabacum]
Sequence

MQIFLTISTKLLQSKSKPFNSLTWIPPLFLQFTKQMSQTTSIPRNQQRVRDHGYDDYMEV
EKKIRKVMKFQDQLLTQPNSMIPISRLDMLARRFGFKQYEAGKFILKFPHVFEVFEHPVQ
RILYCRLTRKALLQIEQEKIALFAQLPEAVTRLRKLLMLSKTGRLRLEHVRIARKEFGLP
DDFEFSVVLKYPMYFRLFDAKETRNKYIEVVEKDQMLAVCAVERVREKEYREKGGEEENV
RFYFRVNFPPGFKIGKYYKIAVWKWQRLPYWSPYEDISGYDLRSLEAQKRMEKRAVATIH
ELLSLTVEKKITLERIAHFRLAMDLPKKLKDFLLQHQGIFYISTRGNQGKLHTVFLREAY
RKGELIEPNDLYLARRRLAELVLMSPRKANMDKELVNYRRRGDDDEIADVRRDNTENEGD
HSTVQETVSQDEEREESVDYDDDCSSDSKYTDEEDSGDDVTDDLGKETS

Transcript Sequence

Gene sequence data has not been registered.